Wow this is weird. I recently downloaded Blender 2.79 I’m using Windows 10. I don’t seem to be able to get the Array Modifier to offset array members along the Z axis when using Fixed Count and Relative. I can get them to offset along the Z axis when using Constant. Has a change been made?
Tried before answering and it works, and also knew there’s no mention of changes in the release notes, which gives the answer to your question: no, hasn’t been changed. Why it doesn’t for you is either in your file, or less likely in a messed up blender configuration. Don’t know which, and won’t start guessing.