I am developing a 3D Real Time Visualization Tool, called DeDaLo (www.dedaloengine.org) to help scientist deal with Big Data issues.
As a propaedeutic step, I added some Python plotting modules to Blender, to be used with BGE (not only). You can download it here.
Up to now the most update version is the Linux one, but on the same GitHub repository there is a Windows Version with more or less the same modules.
Hope this could help to save some of your time if you’re looking for a Scientific version of Blender. Let me know of any problem you may find.